BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013E11SP1|AL426546
(851 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1043 1628 0.0
>3x_Contig1043
Length = 5132
Score = 1628 bits (820), Expect = 0.0
Identities = 844/852 (99%), Gaps = 1/852 (0%)
Strand = Plus / Minus
Query: 1 gatctacgtakttt-atgaaaagaattagaaaaaaacaattgtgcgtccgttggggaata 59
|||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4147 gatctacgtagttttatgaaaagaattagaaaaaaacaattgtgcgtccgttggggaata 4088
Query: 60 atgttatcatatacatacacgattatcactctgacaaaaataacagattagtatatgaag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4087 atgttatcatatacatacacgattatcactctgacaaaaataacagattagtatatgaag 4028
Query: 120 acggatgcaaaacctacttccttgtccacttctttgttagaacttcgtagtcctttcttg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4027 acggatgcaaaacctacttccttgtccacttctttgttagaacttcgtagtcctttcttg 3968
Query: 180 ttttgtgttttttttgttttgcatttttcatagcaatttatgtagtctttggtgagaaac 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3967 ttttgtgttttttttgttttgcatttttcatagcaatttatgtagtctttggtgagaaac 3908
Query: 240 tttgccagtgttaacttgaggtttaatatgccaaaactttttgtttataatattcaatga 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3907 tttgccagtgttaacttgaggtttaatatgccaaaactttttgtttataatattcaatga 3848
Query: 300 aatagtgttacaatttaaggcttaggaatttttcaccttacctatttggaaaattgcatc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3847 aatagtgttacaatttaaggcttaggaatttttcaccttacctatttggaaaattgcatc 3788
Query: 360 aacatctcaaattcttgatccgaaaataagagcgataatttatccgtctcaggttccact 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3787 aacatctcaaattcttgatccgaaaataagagcgataatttatccgtctcaggttccact 3728
Query: 420 tctatagggaatctaggggtgctacttggattggatgaagatcctgaagcaatgtccgag 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3727 tctatagggaatctaggggtgctacttggattggatgaagatcctgaagcaatgtccgag 3668
Query: 480 gtcgtcgtagcatgttgaagtactggtgtggttttactgttcgtaagtcatccgttgttt 539
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 3667 gtcgtcgtagcatgttgaagtactggtgtggttttactgttcgtaagtaatccgttgttt 3608
Query: 540 tcgctatttccaatattagagccaaaaatcccatctgagccagtgcccactataatcgag 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3607 tcgctatttccaatattagagccaaaaatcccatctgagccagtgcccactataatcgag 3548
Query: 600 gaactgctatctggaatgagtgagctcgagcccgagggtagttgatctcgattgcttgcc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3547 gaactgctatctggaatgagtgagctcgagcccgagggtagttgatctcgattgcttgcc 3488
Query: 660 attgaatctgatggtgacatcaactgacccaacggcagtggggcaccatagtttggaaga 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3487 attgaatctgatggtgacatcaactgacccaacggcagtggggcaccatagtttggaaga 3428
Query: 720 gattggttctgaattctttgtgcggtgctttgtgatataccaggggggtccgcagsgcct 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 3427 gattggttctgaattctttgtgcggtgctttgtgatataccaggggggtccgcaggacgc 3368
Query: 780 gggaacgtattttgagatgaattaggattcaaaattgtcggctggataggaacataagtc 839
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3367 tggaacgtattttgagatgaattaggattcaaaattgtcggctggataggaacataagtc 3308
Query: 840 tgggtttgttct 851
||||||||||||
Sbjct: 3307 tgggtttgttct 3296
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7092
Number of Sequences: 1807
Number of extensions: 7092
Number of successful extensions: 63
Number of sequences better than 1.0e-20: 1
length of query: 851
length of database: 10,358,551
effective HSP length: 16
effective length of query: 835
effective length of database: 10,329,639
effective search space: 8625248565
effective search space used: 8625248565
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)